Package: jheem2
Type: Package
Title: Code to set up and run simulations using the JHEEM Engine
Version: 1.13.0
Date: 2026-11-13
Author: Anthony Fojo
Maintainer: Anthony Fojo <anthony.fojo@jhmi.edu>
Description: The engine for the JHEEM (Joint HIV Epidemiology and
        Economic Model) family of compartmental models of HIV and STI
        transmission. Provides tools to specify versioned model
        structures, compile and run them as differential-equation
        simulations, manage surveillance data, map between data
        ontologies, define interventions, and calibrate models to data
        via likelihoods.
License: GPL (>= 2)
Imports: Rcpp (>= 1.0.10), R6, bayesian.simulations, codetools,
        deSolve, distributions, ggnewscale, ggplot2, ggsci, locations,
        methods, mvtnorm, plotly, reshape2, scales, stats, stringr,
        tools, ungroup, utils
Remotes: tfojo1/bayesian.simulations, tfojo1/distributions,
        tfojo1/locations
LinkingTo: Rcpp
RoxygenNote: 7.3.2
Depends: R (>= 2.10)
Suggests: testthat (>= 3.0.0)
Config/testthat/edition: 3
Encoding: UTF-8
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
Repository: https://cipher-epi.r-universe.dev
Date/Publication: 2026-11-13 22:14:00 UTC
RemoteUrl: https://github.com/CIPHER-Epi/jheem2
RemoteRef: v1.13.0
RemoteSha: c1c2d3964c49f72da45a3a6595fcdf1203f65b5b
NeedsCompilation: yes
Packaged: 2026-11-13 22:50:45 UTC; root